Teaching topics
Teaching spans introductory bioinformatics, protein sequence and structure analysis, machine learning, deep learning with PyTorch, AlphaFold, protein-protein interactions, membrane proteins, and reproducible computational work with notebooks.
Current bioinformatics courses
Current course information for bioinformatics teaching at Stockholm University.
Official course information; semester and registration details may change.
Recorded lectures
Recorded lectures on computational biology and bioinformatics, including protein structure prediction and evolution.
Selected lecture PDFs
A curated selection of lecture presentations covering deep learning, PyTorch, protein contact prediction, AlphaFold, diffusion models, and introductory bioinformatics.
Selected Jupyter notebooks
Hands-on notebooks for introductory PyTorch, biological machine learning, contact prediction, signal peptide detection, and introductory deep learning.
Download and run locally; the notebooks may require the teaching environment and Python packages.
Selected slide decks
A small selection of slide decks shared for teaching and reference. Please check the sharing status of each deck before reusing material.